Publications

RTG Multiscale Clocks

P. Rojas, O. Piro, ME Garcia "Biological Rhythms Generated by a Single Activator-Repressor Loop with Inhomogeneity and Diffusion" Phys Rev Lett 2024 Jun 28;132(26):268401. DOI: 10.1103/PhysRevLett.132.268401

M. Abebaw Mebratie, R. Nather, G.F. von Rudorff, W.M. Seiler "Machine Learning Conservation Laws of Dynamical Systems." Preprint; arXiv:2405.20857 (2024). https://arxiv.org/abs/2405.20857

N. Hanke and O. Stursberg, “On the Design of Limit Cycles of Planar Switching Affine Systems,” Proc. of the 2023 European Control Conference, pp. 2251–2256, 2023.

N. Hanke, Z. Liu and O. Stursberg, “Approximation of Limit Cycles by Using Planar Switching Affine Systems with Guarantees for Uniqueness and Stability,” Proc. of the 2024 European Control Conference, to appear, 2024.

Trummel, T. and Liu, Z. and Stursberg, O. (2023). On Optimal Synchronization of Diffusively Coupled Heterogeneous Van der Pol Oscillators. IFAC World Congress 2023, Yokohama, JAPAN. https://doi.org/10.48550/arXiv.2303.15890 

Ziebarth J., Seiler, W. M., and Fuhrmann-Lieker, T. (2023). Size-Resolved Modeling of Diatom Populations: Old Findings and New Insights. In Pappas, J. L. The mathematical biology of diatoms (pp. 19-61). Wiley Scrivener Publishing. https://scrivenerpublishing.com/cart/title.php?id=636

Merker, D., Bertinetti, D., Merz, R., Kopnarski, M., Herberg, F. W., Popov, C. (2023). Enhanced protein immobilization efficacy by nanostructuring of ultrananocrystalline diamond surface. Diamond and Related Materials, 136https://doi.org/10.1016/j.diamond.2023.109898 

Stengl M., Plath J. A., Neupert S. und Arnold T. (2022). Newly DFG-funded research training group at the University of Kassel: “Biological clocks on multiple time scales” GRK 2749/1. Neuroforum 2022; 28(4): 253–254. https://doi.org/10.1515/nf-2022-0014

Abbassi, NeH., Jaciuk, M., Scherf, D., Schaffrath, R. et al. (2024). Cryo-EM structures of the human Elongator complex at work. Nat Commun 15, 4094. https://doi.org/10.1038/s41467-024-48251-y 

Görlitz, K., Bessler, L., Helm, M., Schaffrath, R., Klassen, R., (2024). Fluoropyrimidines trigger decay of hypomodified tRNA in yeast. Nucleic Acids Research, gkae341, 0305-1048, https://doi.org/10.1093/nar/gkae341 

N. Hanke and O. Stursberg (2023). On the Design of Limit Cycles of Planar Switching Affine Systems. Proc. of the 2023 European Control Conference, pp. 2251–2256, 2023.

N. Hanke, Z. Liu and O. Stursberg (2024). Approximation of Limit Cycles by Using Planar Switching Affine Systems with Guarantees for Uniqueness and Stability. Proc. of the 2024 European Control Conference, to appear, 2024.

 

Fuhrmann-Lieker, T., Kubetschek, N., Ziebarth, J., Klassen, R., Seiler, W. (2021). Is the diatom sex clock a clock? Journal of the Royal Society Interface, 18:20210146. doi.org/10.1098/rsif.2021.0146

Martin, C., Hering, L., Metzendorf, N., Hormann, S., Kasten, S., Fuhrmann, S., Werckenthin, A., Herberg, F. W., Stengl, M., & Mayer, G. (2020). Analysis of pigment-dispersing factor neuropeptides and their receptor in a velvet worm. Frontiers in Endocrinology, 11. doi.org/10.3389/fendo.2020.00273

Werckenthin, A., Huber, J., Arnold, T., Koziarek, S., Plath, M. J. A., Plath, J. A., Stursberg, O., Herzel, H., & Stengl, M. (2020). Neither per, nor tim1, nor cry2 alone are essential components of the molecular circadian clockwork in the Madeira cockroach. PLOS One, 15(8). doi.org/10.1371/journal.pone.0235930

Rojas, P., Plath, J. A., Gestrich, J., Ananthasubramaniam, B., Garcia, M. E., Herzel, H., & Stengl, M. (2019). Beyond spikes: Multiscale computational analysis of in vivo long-term recordings in the cockroach circadian clock. Network Neuroscience, 3(4), 944–968. doi.org/10.1162/netn_a_00106

Merker, D., Kesper, M., Kailing, L. L., Herberg, F. W., Reithmaier, J. P., Pavlidis, I. V., & Popov, C. (2018). Nanostructured modified ultrananocrystalline diamond surfaces as immobilization support for lipases. Diamond and Related Materials, 90, 32–39. doi.org/10.1016/j.diamond.2018.09.027

Gestrich, J., Giese, M., Shen, W., Zhang, Y., Voss, A., Popov, C., Stengl, M., & Wei, H. (2018). Sensitivity to pigment-dispersing factor (PDF) Is cell-type specific among PDF-expressing circadian clock neurons in the Madeira cockroach. Journal of Biological Rhythms, 33(1), 35–51. doi.org/10.1177/0748730417739471